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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24981133_24981536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24981133 - 24981536

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGATGCTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TAATATTTGAAA

Flanking Amino Acid:

RCTRVVFDEETDPANESKED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

76.4

0.59

69.5

41.4

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

51.2

0.03

1.6

62.1

37.3

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786