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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24983759_24985159_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24983759 - 24985159

Intron Length:

1401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCACTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTATTTTATCA

Flanking Amino Acid:

FGAPGTYNWKGVVRAELKNN

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.8

35.8

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

86.2

0.81

0.7

84.2

30.6

Minor 5ss

45.5

-0.5

3.1

65.3

46.1

Minor BPS

63.2

0.41

1.6

75.3

36.3

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786