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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24989706_24991387_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24989706 - 24991387

Intron Length:

1682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTATAT

5'SS Class:

major

3'SS Sequence:

CCCCCAAATAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTCCCCCAAAT

Flanking Amino Acid:

GSLSDSVSVFRSRPVISIKK

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

70.7

35.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

50.5

0.01

1.1

48.7

30.9

Minor 5ss

38.6

-1.3

3.3

56.3

47.8

Minor BPS

53.9

0.2

80.66

40.1

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786