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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24993865_24994751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24993865 - 24994751

Intron Length:

887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

AATGTTTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TGCTGTTTAAAA

Flanking Amino Acid:

KCVTTKLVLQDVVKDKLRPI

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

70.1

0.45

1.1

65.3

44.8

Minor 5ss

-2.2

3.3

45.6

Minor BPS

54.1

0.13

1.9

64.9

41.7

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786