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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24994902_24995604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24994902 - 24995604

Intron Length:

703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTTATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTGGTTTTATCT

Flanking Amino Acid:

LDSNEPKTAKVEFLKEGCGE

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

75.5

40.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

73.2

0.52

66.6

44.3

Minor 5ss

45.5

-0.5

3.1

65.9

39.3

Minor BPS

57.2

0.3

1.7

74.5

43.2

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786