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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24997079_24997263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24997079 - 24997263

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

TDLDINLRLETTSTQANLTT

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

87.9

29.3

Major BPS

62.4

0.31

32.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

47.5

-0.2

2.8

66.5

37.9

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786