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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24997342_24997439_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24997342 - 24997439

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCCACCTGAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

CCCACCTGAACA

Flanking Amino Acid:

VVLELFLSLTGVAKPSQVYF

Intron Amino Acid Position:

798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

58.6

0.19

53.1

35.3

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

56.7

0.21

1.6

60.67

45.1

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786