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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24997543_24998573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24997543 - 24998573

Intron Length:

1031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTATTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTATTTTAACA

Flanking Amino Acid:

IGSLIEYEFRVTNLGRPLKT

Intron Amino Acid Position:

833

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

76.8

33.7

Major BPS

73.1

0.58

79.6

29.1

Major PPT

84.3

0.77

0.9

81.1

35.2

Minor 5ss

33.2

-1.9

2.8

38.8

40.3

Minor BPS

77.6

0.86

1.1

83.48

30.3

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016338

24963351 - 25004136

40786

ENSAPLT00000044420

24963351 - 25004015

40665