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Intron Name: Anas_platyrhynchos_platyrhynchos_7_24998748_24999719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24998748 - 24999719

Intron Length:

972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTTTTCTCCAAG

Flanking Amino Acid:

QNEINSLHLAESHNSRRKRE

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

78.8

31.5

Major BPS

75.8

0.64

65.8

Major PPT

79.5

0.66

79.5

32.9

Minor 5ss

-1

2.8

53.4

43.8

Minor BPS

48.5

-0.2

2.1

64.47

43.3

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786