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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25000296_25000377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25000296 - 25000377

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TGTACTTTATTT

Flanking Amino Acid:

SRLWNSTFVEEYSKMNYLDI

Intron Amino Acid Position:

961

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.2

36.3

Major BPS

75.1

0.62

65.6

Major PPT

69.4

0.44

1.1

65.9

Minor 5ss

38.6

-1.3

52.1

38.3

Minor BPS

61.6

0.44

1.6

77.27

39.6

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786