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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25000477_25000813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25000477 - 25000813

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCATCTTCACCT

Flanking Amino Acid:

NVKLTNEIAQVRVTVFPAKP

Intron Amino Acid Position:

994

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.7

33.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

86.1

0.81

0.6

85.6

21.8

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

54.4

0.22

1.8

72.66

44.4

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665

ENSAPLT00000016338

24963351 - 25004136

40786