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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25000940_25002302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25000940 - 25002302

Intron Length:

1363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

AATGACTAAATA

Flanking Amino Acid:

LALLVFLLWKCGFFKRNKKD

Intron Amino Acid Position:

1036

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

0.1

59.7

32.6

Major PPT

78.8

0.65

0.8

73.7

31.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

48.3

-0.1

1.9

59.74

40.3

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665