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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25002433_25003992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

25002433 - 25003992

Intron Length:

1560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATCAAT

5'SS Class:

major

3'SS Sequence:

TTCTTGGCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

TTAAACCTAACC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

72.5

38.4

Major BPS

0.47

69.9

32.6

Major PPT

75.2

0.57

0.9

72.8

37.5

Minor 5ss

41.3

-1

2.9

54.6

43.8

Minor BPS

54.7

0.13

1.9

70.54

39.7

Associated Gene:

Gene:

ITGA6

Ensembl Gene ID:

ENSAPLG00000015601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044420

24963351 - 25004015

40665