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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25041806_25042780_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25041806 - 25042780

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCACTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAA

U12 Branch Point Sequence:

GTGTTTTCCACT

Flanking Amino Acid:

GKSKRRFPDFGGLRKSGGKG

Intron Amino Acid Position:

1119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

81.6

33.2

Major BPS

66.7

0.41

57.8

Major PPT

81.2

0.7

79.4

27.7

Minor 5ss

43.4

-0.7

3.2

57.2

46.9

Minor BPS

48.1

-0

67.99

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015688

25028915 - 25068443

39529

ENSAPLT00000043316

25028915 - 25068443

39529