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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25146642_25158889_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25146642 - 25158889

Intron Length:

12248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCGGCG

5'SS Class:

major

3'SS Sequence:

TGTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAA

U12 Branch Point Sequence:

CTGTTGGGAACT

Flanking Amino Acid:

SGEWIACLDKRPLERSSEDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.2

43.2

Major BPS

60.3

0.26

1.2

51.7

43.9

Major PPT

89.8

0.89

0.7

84.9

29.9

Minor 5ss

41.2

-1

3.4

56.2

48.2

Minor BPS

41.6

-0.5

2.6

63.52

46.9

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582