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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25160196_25168339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25160196 - 25168339

Intron Length:

8144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCATTTTTAATT

Flanking Amino Acid:

VKVSDTSNHQDAVTICTLGI

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.59

1.1

76.5

35.6

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

72.8

0.79

1.1

79.64

37.1

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582