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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25261673_25261964_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25261673 - 25261964

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAGGA

5'SS Class:

major

3'SS Sequence:

CATGATCACCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TTCTCCATGATC

Flanking Amino Acid:

PHRPTKTITQVPSEKILRAG

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

37.3

Major BPS

64.7

0.37

1.3

74.7

Major PPT

49.8

-0

1.1

45.8

40.3

Minor 5ss

29.9

-2.3

3.3

39.3

45.9

Minor BPS

64.5

0.44

1.6

74.59

36.5

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582