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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25265728_25271958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25265728 - 25271958

Intron Length:

6231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGCAGA

5'SS Class:

major

3'SS Sequence:

TTTCTACCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GTTATTATAATT

Flanking Amino Acid:

DAHMRMILRKPPGQRTIDDL

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.4

60.2

46.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

0.68

0.7

75.1

Minor 5ss

40.6

-1

2.9

53.3

43.9

Minor BPS

55.5

0.25

1.6

73.87

37.1

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582