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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25272044_25275050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25272044 - 25275050

Intron Length:

3007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TATATATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

ACTTATATAATT

Flanking Amino Acid:

IKALSHLSTTVKRELAGVLI

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

39.3

Major BPS

78.6

0.71

78.6

Major PPT

0.45

1.1

72.8

41.2

Minor 5ss

44.1

-0.6

2.9

63.9

41.5

Minor BPS

53.2

0.18

1.8

72.01

39.2

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582