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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25275932_25276951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25275932 - 25276951

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

CTGCATGTAAAT

Flanking Amino Acid:

GSVNVVIYGKGVVCTLHEGD

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

80.4

0.68

0.9

76.3

32.3

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

42.7

-0.4

2.1

59.17

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582