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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25277099_25278383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25277099 - 25278383

Intron Length:

1285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCGTG

5'SS Class:

major

3'SS Sequence:

ACTTGTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ACTTTCTTAAAA

Flanking Amino Acid:

DKEDFNRILRDVEANTVRLK

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

67.1

44.6

Major BPS

82.2

0.8

71.9

35.8

Major PPT

80.1

0.68

0.9

73.4

36.4

Minor 5ss

39.5

-1.2

3.4

47.2

48.2

Minor BPS

71.5

0.67

1.3

74.59

36.8

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582