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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25288909_25289664_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25288909 - 25289664

Intron Length:

756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAGG

5'SS Class:

strong_major

3'SS Sequence:

GTATCATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AGTCATTTAAAG

Flanking Amino Acid:

EDEAAMAFLEEFYVSVSDDT

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

68.1

42.8

Major BPS

81.6

0.78

0.8

24.9

Major PPT

76.9

0.61

0.9

70.1

40.1

Minor 5ss

-1.2

2.8

46.8

Minor BPS

49.4

-0.1

1.7

54.8

39.6

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582