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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25290204_25290436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25290204 - 25290436

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

GATTAATTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGATGATTAATT

Flanking Amino Acid:

SEEPKAPQKKHKVLLQLFNT

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

75.4

0.57

70.6

44.1

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

55.1

0.24

74.98

41.6

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582