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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25294366_25297445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25294366 - 25297445

Intron Length:

3080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

ACPRDQFDSLAPLPEQEGPS

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.2

0.88

0.7

85.8

27.5

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

RAPGEF4

Ensembl Gene ID:

ENSAPLG00000013981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014632

25146577 - 25316158

169582