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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25362999_25369041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25362999 - 25369041

Intron Length:

6043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AGTACAGAAATA

Flanking Amino Acid:

ETCDTYSYGVVLWEMLTREV

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

88.1

0.86

0.8

80.8

36.8

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

-0.7

2.3

52.4

39.5

Associated Gene:

Gene:

MAP3K20

Ensembl Gene ID:

ENSAPLG00000013963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014547

25332394 - 25391025

58632