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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25372774_25378292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25372774 - 25378292

Intron Length:

5519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTTAA

5'SS Class:

major

3'SS Sequence:

CTTTTGTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GGTAACATAAAT

Flanking Amino Acid:

MHQCWEADSKKRPSFKQIIS

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

34.2

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

82.4

0.73

0.8

80.6

31.4

Minor 5ss

38.2

-1.3

3.1

49.1

47.1

Minor BPS

47.3

-0.1

1.9

66.63

42.5

Associated Gene:

Gene:

MAP3K20

Ensembl Gene ID:

ENSAPLG00000013963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014547

25332394 - 25391025

58632