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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25413256_25416440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25413256 - 25416440

Intron Length:

3185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

CTTTGCACAAAG

Flanking Amino Acid:

EGHSRSRSDSSIDSQWMKTL

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

75.1

35.1

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

0.59

0.9

69.6

36.7

Minor 5ss

36.2

-1.6

2.9

44.9

36.9

Minor BPS

42.8

-0.6

2.3

53.91

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008686

25397203 - 25417114

19912