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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25431993_25432700_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25431993 - 25432700

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCAGGGGCCAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GGGCTTTTAAAT

Flanking Amino Acid:

GRRSLPTASQRLPRRSLPRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

93.7

19.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

45.8

-0.2

1.1

35.6

34.2

Minor 5ss

43.4

-0.7

2.9

60.8

37.6

Minor BPS

53.4

0.19

1.4

63.87

40.1

Associated Gene:

Gene:

CDCA7

Ensembl Gene ID:

ENSAPLG00000008313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008657

25431912 - 25434994

3083