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Intron Name: Anas_platyrhynchos_platyrhynchos_7_2544882_2548038_R

Intron Information:

Intron Rank:

135294

Intron Class:

major

Intron Phase:

Intron Coordinates:

2544882 - 2548038

Intron Length:

3157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGGTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

CTTTCAAAAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

69.3

0.43

69.2

41.8

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

48.5

-0.1

2.2

68.57

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024328

2544776 - 2549578

4803