Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_25755292_25755553_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25755292 - 25755553

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGACTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTGTTATTAAAA

Flanking Amino Acid:

RFYHDWNDKEIDVLNKHLFF

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.9

38.1

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

79.4

0.66

0.8

Minor 5ss

44.1

-0.6

3.2

63.6

48.1

Minor BPS

62.2

0.38

1.7

73.52

37.9

Associated Gene:

Gene:

OLA1

Ensembl Gene ID:

ENSAPLG00000008147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008490

25716118 - 25812294

96177