Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_25755635_25767746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25755635 - 25767746

Intron Length:

12112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGATCTCGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTTCTTGATC

Flanking Amino Acid:

GGDKKLKPEYDVMCKIKTWV

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

62.8

0.29

57.7

38.4

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

0.93

84.94

26.6

Associated Gene:

Gene:

OLA1

Ensembl Gene ID:

ENSAPLG00000008147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008490

25716118 - 25812294

96177