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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25767923_25803157_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
25767923 - 25803157

Intron Length:
35235

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGC|GTATGTAAA

5'SS Class:
major

3'SS Sequence:
TTCTTTGGTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAATAT

U12 Branch Point Sequence:
TGTAACTTAAAC

Flanking Amino Acid:
NACDGIFHLMRAFEDDDITH

Intron Amino Acid Position:
125

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.3
0.32
1.3
66.8
40.4

Major BPS
67.5
0.44
1.1
63.7
42.3

Major PPT
76.8
0.6
0.9
76.8
37.4

Minor 5ss
42.1
-0.9
2.5
45.8
42.8

Minor BPS
60.9
0.32
1.7
70.98
39.2

Associated Gene:

Gene:
OLA1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25716118 - 25812294
96177