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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25845655_25847304_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25845655 - 25847304

Intron Length:

1650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGAAAATAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTATTTTGAAAA

Flanking Amino Acid:

LSTKQKQKLLRKLDRLEKKK

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

49.3

-0

1.2

47.3

42.8

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

59.3

0.29

1.5

70.08

35.6

Associated Gene:

Gene:

CIR1

Ensembl Gene ID:

ENSAPLG00000008087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008441

25844931 - 25866109

21179