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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25866704_25867388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25866704 - 25867388

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGCGCG

5'SS Class:

major

3'SS Sequence:

CCTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TGGTTCCAAAGA

Flanking Amino Acid:

DEALLGMDLVRLGLERADTA

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

53.3

44.1

Major BPS

72.5

0.56

1.1

63.4

Major PPT

81.4

0.71

0.8

80.3

31.8

Minor 5ss

38.2

-1.3

3.1

47.6

Minor BPS

43.6

-0.4

2.1

55.89

43.3

Associated Gene:

Gene:

SCRN3

Ensembl Gene ID:

ENSAPLG00000008066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008382

25866250 - 25873473

7224