Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_25882127_25883110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25882127 - 25883110

Intron Length:

984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTATC

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

FFCAVFNFGQGFISFGIFGL

Intron Amino Acid Position:

694

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

78.1

36.6

Major BPS

69.2

0.48

1.3

71.9

Major PPT

88.4

0.86

0.6

82.3

29.8

Minor 5ss

-1.2

3.1

43.3

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

GPR155

Ensembl Gene ID:

ENSAPLG00000008000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038631

25878661 - 25926828

48168

ENSAPLT00000008315

25878661 - 25899437

20777