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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25883207_25884452_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
25883207 - 25884452

Intron Length:
1246

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAAATACT

5'SS Class:
major

3'SS Sequence:
GTTCTCTTAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTTAT

U12 Branch Point Sequence:
GTTCTCTTAACA

Flanking Amino Acid:
CLLLVVGLFANLSSCLWWLF

Intron Amino Acid Position:
662

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.4
0.41
1.1
71.1
38.6

Major BPS
78.7
0.71
1.2
71.7
44.6

Major PPT
77.9
0.63
0.9
73.4
35.8

Minor 5ss
40.6
-1
3
62.3
41.9

Minor BPS
78.1
0.88
1.1
81.59
32.9

Associated Gene:

Gene:
GPR155

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25878661 - 25926828
48168

25878661 - 25899437
20777