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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25886507_25887147_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
25886507 - 25887147

Intron Length:
641

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAGAAA

5'SS Class:
major

3'SS Sequence:
TGTTACTTCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAAAAAT

U12 Branch Point Sequence:
TGTTACTTCATA

Flanking Amino Acid:
ESNYEPSPERGCCSCQTTNG

Intron Amino Acid Position:
583

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.1
68.4
38.1

Major BPS
54
0.1
1
59.7
32.6

Major PPT
74.7
0.56
0.9
69.1
36.7

Minor 5ss
29.9
-2.3
3.3
39.1
46.3

Minor BPS
58.6
0.26
1.9
73.11
38.8

Associated Gene:

Gene:
GPR155

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25878661 - 25926828
48168

25878661 - 25899437
20777