Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_25887164_25887301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25887164 - 25887301

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGAAC

5'SS Class:

major

3'SS Sequence:

ATCTTCTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

TTCTGCTCAACC

Flanking Amino Acid:

NRNRQESNYEPSPERGCCSC

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

66.1

39.5

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

73.3

0.53

0.9

68.4

36.8

Minor 5ss

31.6

-2.1

3.3

42.7

44.4

Minor BPS

60.7

0.31

74.59

42.4

Associated Gene:

Gene:

GPR155

Ensembl Gene ID:

ENSAPLG00000008000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008315

25878661 - 25899437

20777