Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_25932747_25934085_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25932747 - 25934085

Intron Length:

1339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTATTTTACCT

Flanking Amino Acid:

APPPPPTLALANTEKPTLSR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

100

1.24

0.5

100

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

65.4

0.56

1.6

83.78

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024727

25929284 - 25951584

22301