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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25977476_25977865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

25977476 - 25977865

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

GTTTCAATATCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

77.9

36.8

Major BPS

76.9

0.67

1.2

31.9

Major PPT

0.61

73.8

40.8

Minor 5ss

44.1

-0.6

2.9

40.8

Minor BPS

51.7

0.13

2.1

79.49

41.8

Associated Gene:

Gene:

CHRNA1

Ensembl Gene ID:

ENSAPLG00000007803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036940

25976694 - 25984546

7853

ENSAPLT00000008121

25976694 - 25986139

9446