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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25978027_25979893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25978027 - 25979893

Intron Length:

1867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGCAT

5'SS Class:

major

3'SS Sequence:

CTTTCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTAATATCT

Flanking Amino Acid:

TMKSDQESSNAAEEWKFVAM

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.6

39.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.6

0.8

0.7

84.5

23.3

Minor 5ss

34.8

-1.7

3.5

44.9

Minor BPS

48.9

-0

2.1

76.41

39.7

Associated Gene:

Gene:

CHRNA1

Ensembl Gene ID:

ENSAPLG00000007803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008121

25976694 - 25986139

9446

ENSAPLT00000036940

25976694 - 25984546

7853