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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25982868_25983301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25982868 - 25983301

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATTATTTATTT

Flanking Amino Acid:

YDGTVVVINPESDRPDLSNF

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

72.7

38.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

81.1

0.7

0.9

81.5

35.8

Minor 5ss

40.2

-1.1

2.9

52.9

44.1

Minor BPS

59.3

0.37

1.7

77.93

38.7

Associated Gene:

Gene:

CHRNA1

Ensembl Gene ID:

ENSAPLG00000007803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036940

25976694 - 25984546

7853

ENSAPLT00000008121

25976694 - 25986139

9446