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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25983498_25983703_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25983498 - 25983703

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAACAT

U12 Branch Point Sequence:

CTTCCTTTCACA

Flanking Amino Acid:

IWRPDLVLYNNADGDFAIVK

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

75.1

35.1

Major BPS

58.7

0.22

1.2

Major PPT

83.9

0.76

0.7

26.6

Minor 5ss

41.4

-1

2.9

52.3

38.8

Minor BPS

61.3

0.35

1.8

72.26

40.2

Associated Gene:

Gene:

CHRNA1

Ensembl Gene ID:

ENSAPLG00000007803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036940

25976694 - 25984546

7853

ENSAPLT00000008121

25976694 - 25986139

9446