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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25983814_25984233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25983814 - 25984233

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

CCTGGCTGAACT

Flanking Amino Acid:

IVTTNVRLKQQWTDVNLKWN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

1.1

83.2

30.8

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

74.5

0.55

0.7

68.5

Minor 5ss

40.6

-1.1

2.6

50.9

45.5

Minor BPS

49.4

0.03

2.1

68.08

48.5

Associated Gene:

Gene:

CHRNA1

Ensembl Gene ID:

ENSAPLG00000007803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008121

25976694 - 25986139

9446