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Intron Name: Anas_platyrhynchos_platyrhynchos_7_25997870_26000323_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25997870 - 26000323

Intron Length:

2454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

CCTTTCTTACAG

Flanking Amino Acid:

TLRYLMAHLKRVTLHEKENL

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.4

39.5

Major BPS

63.7

0.34

1.6

39.9

Major PPT

88.3

0.86

0.7

83.2

25.4

Minor 5ss

30.7

-2.2

3.4

40.4

45.8

Minor BPS

49.9

-0.1

1.8

55.39

46.1

Associated Gene:

Gene:

CHN1

Ensembl Gene ID:

ENSAPLG00000007680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008026

25997698 - 26093268

95571