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Intron Name: Anas_platyrhynchos_platyrhynchos_7_26025172_26046509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26025172 - 26046509

Intron Length:

21338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTATTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

ACCTCTTAAACT

Flanking Amino Acid:

TGEDEVAEKRLTSLVRRATL

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

77.9

38.6

Major BPS

77.8

0.69

78.2

31.8

Major PPT

78.3

0.64

0.9

36.3

Minor 5ss

40.6

-1

2.9

49.4

46.6

Minor BPS

61.8

0.45

1.7

73.4

44.1

Associated Gene:

Gene:

CHN1

Ensembl Gene ID:

ENSAPLG00000007680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008026

25997698 - 26093268

95571