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Intron Name: Anas_platyrhynchos_platyrhynchos_7_26117227_26123912_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26117227 - 26123912

Intron Length:

6686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTTCTCCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACATAA

U12 Branch Point Sequence:

AAGTACATAACT

Flanking Amino Acid:

DLSSLNGQLQNEVTLLRNEV

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.5

Major BPS

57.2

0.18

53.3

33.7

Major PPT

81.4

0.71

0.7

74.1

31.1

Minor 5ss

70.5

0.69

2.2

81.8

38.5

Minor BPS

0.3

1.8

74.18

41.8

Associated Gene:

Gene:

ATF2

Ensembl Gene ID:

ENSAPLG00000007673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041697

26110753 - 26156455

45703

ENSAPLT00000021072

26110753 - 26153073

42321

ENSAPLT00000008002

26110753 - 26156455

45703