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Intron Name: Anas_platyrhynchos_platyrhynchos_7_26126756_26134946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26126756 - 26134946

Intron Length:

8191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

PQPVQSEAKLRLKAALTQQH

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

0.1

59.7

32.6

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

ATF2

Ensembl Gene ID:

ENSAPLG00000007673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021072

26110753 - 26153073

42321

ENSAPLT00000008002

26110753 - 26156455

45703