Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_26274449_26275886_R

Intron Information:

Intron Rank:

149878

Intron Class:

major

Intron Phase:

Intron Coordinates:

26274449 - 26275886

Intron Length:

1438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTATCCCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTCTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.6

0.69

0.8

78.1

30.5

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

72.1

0.67

1.5

79.45

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030838

26265571 - 26276169

10599