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Intron Name: Anas_platyrhynchos_platyrhynchos_7_26434345_26435639_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
26434345 - 26435639

Intron Length:
1295

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGAACT

5'SS Class:
strong_major

3'SS Sequence:
TGCTTTTGTGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTTAC

U12 Branch Point Sequence:
GACTGCTTACTG

Flanking Amino Acid:
MALKEEFEYIAFRCAYCFFL

Intron Amino Acid Position:
201

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.1
1.02
0.7
87.2
27

Major BPS
66.4
0.41
1.1
57.4
41.4

Major PPT
76.1
0.59
0.9
72.8
37.5

Minor 5ss
36.1
-1.6
3
50.2
45.8

Minor BPS
46.1
-0.4
2.1
48.68
45.2

Associated Gene:

Gene:
LNPK

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26428260 - 26446925
18666